SNP Detail For rs17232789
1.Mapping Information
Human SNP ID rs17232789
Human chromosome chr8
Human SNP position 121610260
Pig chromosome chr4
Pig SNP position 18455119
2.Annotation Information
PubMed ID21546767
JournalAm J Nephrol
Linkwww.ncbi.nlm.nih.gov/pubmed/21546767
StudyGenome-wide association scan for survival on dialysis in African-Americans with type 2 diabetes.
Disease/TraitDialysis-related mortality
Initial sample610 African American type 2 diabetes cases
Replication sampleNA
Region8q24.13
Chromosome idchr8
Chromosome position121610260
Reported geneHAS2
Mapped geneRPL35AP19 - HAS2
Upstream gene id100271322
Downstream gene id3037
SNP gene ids
Upstream gene distance229721
Downstream gene distance1856
SNP risk allelers17232789-?
SNPsrs17232789
Merged0
SNP id current17232789
Contextdownstream_gene_variant
Intergenic1
Allele frequency0.63
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta1.59
%95 Ci[1.30-1.92]
PlatformAffymetrix [832357]
CNVN
Mapped traitchronic kidney disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003884
Study accessionGCST001066