SNP Detail For rs17231212
1.Mapping Information
Human SNP ID rs17231212
Human chromosome chr7
Human SNP position 135100989
Pig chromosome chr18
Pig SNP position 14991024
2.Annotation Information
PubMed ID22610502
JournalHum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22610502
StudyGenome-wide analysis of polymorphisms associated with cytokine responses in smallpox vaccine recipients.
Disease/TraitImmune reponse to smallpox (secreted IL-10)
Initial sampleUp to 512 European ancestry individuals, up to 199 African American individuals
Replication sampleNA
Region7q33
Chromosome idchr7
Chromosome position135100989
Reported geneLOC100129730
Mapped geneAGBL3
Upstream gene id
Downstream gene id
SNP gene ids340351
Upstream gene distance
Downstream gene distance
SNP risk allelers17231212-G
SNPsrs17231212
Merged0
SNP id current17231212
Contextintron_variant
Intergenic0
Allele frequency
P value0.00000002
Pvalue mlog7.69897000433601
P value text(AA)
Or beta
%95 Ci
PlatformIllumina [NR]
CNVN
Mapped traitresponse to vaccine, cytokine measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004645, http://www.ebi.ac.uk/efo/EFO_0004873
Study accessionGCST001534