SNP Detail For rs17228212
1.Mapping Information
Human SNP ID rs17228212
Human chromosome chr15
Human SNP position 67166301
Pig chromosome chr1
Pig SNP position 182924996
2.Annotation Information
PubMed ID17634449
JournalN Engl J Med
Linkwww.ncbi.nlm.nih.gov/pubmed/17634449
StudyGenomewide association analysis of coronary artery disease.
Disease/TraitCoronary heart disease
Initial sample1,926 European ancestry cases, 2,938 European ancestry controls
Replication sample875 European ancestry cases, 1,644 European ancestry controls
Region15q22.33
Chromosome idchr15
Chromosome position67166301
Reported geneSMAD3
Mapped geneSMAD3
Upstream gene id
Downstream gene id
SNP gene ids4088
Upstream gene distance
Downstream gene distance
SNP risk allelers17228212-C
SNPsrs17228212
Merged0
SNP id current17228212
Contextintron_variant
Intergenic0
Allele frequency0.3
P value0.0000002
Pvalue mlog6.69897000433601
P value text
Or beta1.21
%95 Ci[1.13-1.30]
PlatformAffymetrix [377857]
CNVN
Mapped traitcoronary heart disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001645
Study accessionGCST000057