Human SNP ID | rs17228212 |
---|---|
Human chromosome | chr15 |
Human SNP position | 67166301 |
Pig chromosome | chr1 |
Pig SNP position | 182924996 |
PubMed ID | 17634449 |
---|---|
Journal | N Engl J Med |
Link | www.ncbi.nlm.nih.gov/pubmed/17634449 |
Study | Genomewide association analysis of coronary artery disease. |
Disease/Trait | Coronary heart disease |
Initial sample | 1,926 European ancestry cases, 2,938 European ancestry controls |
Replication sample | 875 European ancestry cases, 1,644 European ancestry controls |
Region | 15q22.33 |
Chromosome id | chr15 |
Chromosome position | 67166301 |
Reported gene | SMAD3 |
Mapped gene | SMAD3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 4088 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17228212-C |
SNPs | rs17228212 |
Merged | 0 |
SNP id current | 17228212 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.3 |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | |
Or beta | 1.21 |
%95 Ci | [1.13-1.30] |
Platform | Affymetrix [377857] |
CNV | N |
Mapped trait | coronary heart disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001645 |
Study accession | GCST000057 |