SNP Detail For rs17221829
1.Mapping Information
Human SNP ID rs17221829
Human chromosome chr11
Human SNP position 89733564
Pig chromosome chr13
Pig SNP position 156176472
2.Annotation Information
PubMed ID24047446
JournalWorld J Biol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/24047446
StudyGenome-wide association study of co-occurring anxiety in major depression.
Disease/TraitAnxiety in major depressive disorder
Initial sample1,080 European ancestry cases, 442 European ancestry controls
Replication sampleNA
Region11q14.3
Chromosome idchr11
Chromosome position89733564
Reported geneLOC100130203
Mapped geneTRIM77 - TRIM64DP
Upstream gene id390231
Downstream gene id727828
SNP gene ids
Upstream gene distance15692
Downstream gene distance43417
SNP risk allelers17221829-A
SNPsrs17221829
Merged0
SNP id current17221829
Contextnon_coding_transcript_exon_variant
Intergenic1
Allele frequency0.38
P value0.000005
Pvalue mlog5.30102999566398
P value text(Quantitative)
Or beta0.4408
%95 Ci[NR] unit decrease
PlatformIllumina [471581]
CNVN
Mapped traitunipolar depression, anxiety
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003761, http://www.ebi.ac.uk/efo/EFO_0005230
Study accessionGCST002202