Human SNP ID | rs17221829 |
---|---|
Human chromosome | chr11 |
Human SNP position | 89733564 |
Pig chromosome | chr13 |
Pig SNP position | 156176472 |
PubMed ID | 24047446 |
---|---|
Journal | World J Biol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/24047446 |
Study | Genome-wide association study of co-occurring anxiety in major depression. |
Disease/Trait | Anxiety in major depressive disorder |
Initial sample | 1,080 European ancestry cases, 442 European ancestry controls |
Replication sample | NA |
Region | 11q14.3 |
Chromosome id | chr11 |
Chromosome position | 89733564 |
Reported gene | LOC100130203 |
Mapped gene | TRIM77 - TRIM64DP |
Upstream gene id | 390231 |
Downstream gene id | 727828 |
SNP gene ids | |
Upstream gene distance | 15692 |
Downstream gene distance | 43417 |
SNP risk allele | rs17221829-A |
SNPs | rs17221829 |
Merged | 0 |
SNP id current | 17221829 |
Context | non_coding_transcript_exon_variant |
Intergenic | 1 |
Allele frequency | 0.38 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (Quantitative) |
Or beta | 0.4408 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [471581] |
CNV | N |
Mapped trait | unipolar depression, anxiety |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003761, http://www.ebi.ac.uk/efo/EFO_0005230 |
Study accession | GCST002202 |