SNP Detail For rs17216786
1.Mapping Information
Human SNP ID rs17216786
Human chromosome chr16
Human SNP position 83453866
Pig chromosome chr6
Pig SNP position 5565024
2.Annotation Information
PubMed ID20195266
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/20195266
StudyGenomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs.
Disease/TraitResponse to antipsychotic treatment
Initial sample421 European ancestry, 214 African American, and 103 cases
Replication sampleNA
Region16q23.3
Chromosome idchr16
Chromosome position83453866
Reported geneCDH13
Mapped geneCDH13
Upstream gene id
Downstream gene id
SNP gene ids1012
Upstream gene distance
Downstream gene distance
SNP risk allelers17216786-?
SNPsrs17216786
Merged0
SNP id current17216786
Contextintron_variant
Intergenic0
Allele frequency0.054
P value0.000001
Pvalue mlog6
P value text(clozapine-triglycerides)
Or beta
%95 Ci
PlatformAffymetrix [492900]
CNVN
Mapped traitresponse to clozapine
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097338
Study accessionGCST000618