Human SNP ID | rs17212303 |
---|---|
Human chromosome | chr4 |
Human SNP position | 181650466 |
Pig chromosome | chr15 |
Pig SNP position | 49809769 |
PubMed ID | 21685187 |
---|---|
Journal | Thorax |
Link | www.ncbi.nlm.nih.gov/pubmed/21685187 |
Study | Genome-wide association study of smoking behaviours in patients with COPD. |
Disease/Trait | Age at smoking initiation in chronic obstructive pulmonary disease |
Initial sample | 3,397 European ancestry cases |
Replication sample | NA |
Region | 4q34.3 |
Chromosome id | chr4 |
Chromosome position | 181650466 |
Reported gene | intergenic |
Mapped gene | LOC105377574 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105377574 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17212303-C |
SNPs | rs17212303 |
Merged | 0 |
SNP id current | 17212303 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | 0.96 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 0.094 |
%95 Ci | unit increase |
Platform | Illumina [~ 6300000] (imputed) |
CNV | N |
Mapped trait | chronic obstructive pulmonary disease, smoking initiation |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000341, http://www.ebi.ac.uk/efo/EFO_0005670 |
Study accession | GCST001113 |