SNP Detail For rs17212303
1.Mapping Information
Human SNP ID rs17212303
Human chromosome chr4
Human SNP position 181650466
Pig chromosome chr15
Pig SNP position 49809769
2.Annotation Information
PubMed ID21685187
JournalThorax
Linkwww.ncbi.nlm.nih.gov/pubmed/21685187
StudyGenome-wide association study of smoking behaviours in patients with COPD.
Disease/TraitAge at smoking initiation in chronic obstructive pulmonary disease
Initial sample3,397 European ancestry cases
Replication sampleNA
Region4q34.3
Chromosome idchr4
Chromosome position181650466
Reported geneintergenic
Mapped geneLOC105377574
Upstream gene id
Downstream gene id
SNP gene ids105377574
Upstream gene distance
Downstream gene distance
SNP risk allelers17212303-C
SNPsrs17212303
Merged0
SNP id current17212303
Contextintergenic_variant
Intergenic0
Allele frequency0.96
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.094
%95 Ciunit increase
PlatformIllumina [~ 6300000] (imputed)
CNVN
Mapped traitchronic obstructive pulmonary disease, smoking initiation
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000341, http://www.ebi.ac.uk/efo/EFO_0005670
Study accessionGCST001113