Human SNP ID | rs1719271 |
---|---|
Human chromosome | chr15 |
Human SNP position | 64891602 |
Pig chromosome | chr1 |
Pig SNP position | 117923147 |
PubMed ID | 22139419 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/22139419 |
Study | New gene functions in megakaryopoiesis and platelet formation. |
Disease/Trait | Platelet count |
Initial sample | 47,005 European ancestry individuals, 1,661 Val Borbera individuals |
Replication sample | Up to 18,838 European ancestry individuals |
Region | 15q22.31 |
Chromosome id | chr15 |
Chromosome position | 64891602 |
Reported gene | ANKDD1A |
Mapped gene | PLEKHO2 - ANKDD1A |
Upstream gene id | 80301 |
Downstream gene id | 348094 |
SNP gene ids | |
Upstream gene distance | 23600 |
Downstream gene distance | 20300 |
SNP risk allele | rs1719271-G |
SNPs | rs1719271 |
Merged | 0 |
SNP id current | 1719271 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.00000000001 |
Pvalue mlog | 11 |
P value text | |
Or beta | 3.414 |
%95 Ci | [2.43-4.4] 10^9/l increase |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | platelet count |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004309 |
Study accession | GCST001337 |