Human SNP ID | rs17177078 |
---|---|
Human chromosome | chr16 |
Human SNP position | 24799360 |
Pig chromosome | chr13 |
Pig SNP position | 106982182 |
PubMed ID | 23386860 |
---|---|
Journal | Front Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23386860 |
Study | Exploring genome-wide - dietary heme iron intake interactions and the risk of type 2 diabetes. |
Disease/Trait | Type 2 diabetes (dietary heme iron intake interaction) |
Initial sample | 1,806 European ancestry cases, 2,965 European ancestry controls |
Replication sample | NA |
Region | 16p12.1 |
Chromosome id | chr16 |
Chromosome position | 24799360 |
Reported gene | TNRC6A |
Mapped gene | TNRC6A |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 27327 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17177078-? |
SNPs | rs17177078 |
Merged | 0 |
SNP id current | 17177078 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 0.83 |
%95 Ci | [NR] unit increase |
Platform | Affymetrix [681770] |
CNV | N |
Mapped trait | type II diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001360 |
Study accession | GCST001843 |