SNP Detail For rs17177078
1.Mapping Information
Human SNP ID rs17177078
Human chromosome chr16
Human SNP position 24799360
Pig chromosome chr13
Pig SNP position 106982182
2.Annotation Information
PubMed ID23386860
JournalFront Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23386860
StudyExploring genome-wide - dietary heme iron intake interactions and the risk of type 2 diabetes.
Disease/TraitType 2 diabetes (dietary heme iron intake interaction)
Initial sample1,806 European ancestry cases, 2,965 European ancestry controls
Replication sampleNA
Region16p12.1
Chromosome idchr16
Chromosome position24799360
Reported geneTNRC6A
Mapped geneTNRC6A
Upstream gene id
Downstream gene id
SNP gene ids27327
Upstream gene distance
Downstream gene distance
SNP risk allelers17177078-?
SNPsrs17177078
Merged0
SNP id current17177078
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta0.83
%95 Ci[NR] unit increase
PlatformAffymetrix [681770]
CNVN
Mapped traittype II diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001360
Study accessionGCST001843