Human SNP ID | rs17170316 |
---|---|
Human chromosome | chr7 |
Human SNP position | 33633653 |
Pig chromosome | chr18 |
Pig SNP position | 43725798 |
PubMed ID | 21993531 |
---|---|
Journal | Genes Immun |
Link | www.ncbi.nlm.nih.gov/pubmed/21993531 |
Study | Genome-wide association study does not reveal major genetic determinants for anti-cytomegalovirus antibody response. |
Disease/Trait | Cytomegalovirus antibody response |
Initial sample | 1,485 European ancestry sero-postitive individuals, 648 European ancestry sero-negative individuals |
Replication sample | NA |
Region | 7p14.3 |
Chromosome id | chr7 |
Chromosome position | 33633653 |
Reported gene | intergenic |
Mapped gene | BBS9 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 27241 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17170316-A |
SNPs | rs17170316 |
Merged | 0 |
SNP id current | 17170316 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | 0.07 |
P value | 0.0000008 |
Pvalue mlog | 6.09691001300805 |
P value text | |
Or beta | 0.325 |
%95 Ci | [0.20-0.45] unit decrease |
Platform | Illumina [546677] |
CNV | N |
Mapped trait | response to virus |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0009615 |
Study accession | GCST001272 |