SNP Detail For rs17168486
1.Mapping Information
Human SNP ID rs17168486
Human chromosome chr7
Human SNP position 14858657
Pig chromosome chr9
Pig SNP position 92641378
2.Annotation Information
PubMed ID24509480
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24509480
StudyGenome-wide trans-ancestry meta-analysis provides insight into the genetic architecture of type 2 diabetes susceptibility.
Disease/TraitType 2 diabetes
Initial sample12,171 European ancestry cases, 56,862 European ancestry controls, 6,952 East Asian ancestry cases, 11,865 East Asian ancestry controls, 5,561 South Asian ancestry cases, 14,458 South Asian ancestry controls, 1,804 Mexican ancestry cases, 779 Mexican ance
Replication sample21,491 European ancestry cases, 55,647 European ancestry controls
Region7p21.2
Chromosome idchr7
Chromosome position14858657
Reported geneDGKB
Mapped geneDGKB
Upstream gene id
Downstream gene id
SNP gene ids1607
Upstream gene distance
Downstream gene distance
SNP risk allelers17168486-T
SNPsrs17168486
Merged0
SNP id current17168486
Contextintron_variant
Intergenic0
Allele frequency0.19
P value0.0000003
Pvalue mlog6.52287874528033
P value text
Or beta1.13
%95 Ci[1.07-1.19]
PlatformAffymetrix, Illumina [2500000] (imputed)
CNVN
Mapped traittype II diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001360
Study accessionGCST002352