SNP Detail For rs17162257
1.Mapping Information
Human SNP ID rs17162257
Human chromosome chr1
Human SNP position 26602511
Pig chromosome chr6
Pig SNP position 77497015
2.Annotation Information
PubMed ID24529757
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/24529757
StudyGenome-wide association study combining pathway analysis for typical sporadic amyotrophic lateral sclerosis in Chinese Han populations.
Disease/TraitAmyotrophic lateral sclerosis (sporadic)
Initial sample250 Han Chinese ancestry cases, 250 Han Chinese ancestry controls
Replication sampleNA
Region1p36.11
Chromosome idchr1
Chromosome position26602511
Reported geneRPS6KA1
Mapped geneRPS6KA1 - LOC105376888
Upstream gene id6195
Downstream gene id105376888
SNP gene ids
Upstream gene distance27481
Downstream gene distance80063
SNP risk allelers17162257-?
SNPsrs17162257
Merged0
SNP id current17162257
Contextupstream_gene_variant
Intergenic1
Allele frequency
P value0.000001
Pvalue mlog6
P value text
Or beta
%95 Ci
PlatformIllumina [859311]
CNVN
Mapped traitsporadic amyotrophic lateral sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001357
Study accessionGCST002337