Human SNP ID | rs17158807 |
---|---|
Human chromosome | chr15 |
Human SNP position | 83580708 |
Pig chromosome | chr7 |
Pig SNP position | 56908906 |
PubMed ID | 26584805 |
---|---|
Journal | Genes Nutr |
Link | www.ncbi.nlm.nih.gov/pubmed/26584805 |
Study | A genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population. |
Disease/Trait | Plasma omega-6 polyunsaturated fatty acid levels (linoleic acid) |
Initial sample | 717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls |
Replication sample | NA |
Region | 15q25.2 |
Chromosome id | chr15 |
Chromosome position | 83580708 |
Reported gene | NR |
Mapped gene | SH3GL3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 6457 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17158807-T |
SNPs | rs17158807 |
Merged | |
SNP id current | 17158807 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.0822 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 0.0412 |
%95 Ci | [0.024-0.058] unit increase |
Platform | Illumina [up to 1980188] (imputed) |
CNV | N |
Mapped trait | linoleic acid measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006807 |
Study accession | GCST003239 |