SNP Detail For rs17140875
1.Mapping Information
Human SNP ID rs17140875
Human chromosome chr7
Human SNP position 19208655
Pig chromosome chr9
Pig SNP position 97421884
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region7p21.1
Chromosome idchr7
Chromosome position19208655
Reported geneFERD3L
Mapped geneFERD3L - LOC105375179
Upstream gene id222894
Downstream gene id105375179
SNP gene ids
Upstream gene distance63234
Downstream gene distance195041
SNP risk allelers17140875-A
SNPsrs17140875
Merged0
SNP id current17140875
Contextintergenic_variant
Intergenic1
Allele frequency0.051
P value0.000005
Pvalue mlog5.30102999566398
P value text(Sleep duration )
Or beta0.02
%95 Ci[NR] min/d increase
PlatformIllumina [899892]
CNVN
Mapped traitsleep measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004870
Study accessionGCST001762