SNP Detail For rs17137734
1.Mapping Information
Human SNP ID rs17137734
Human chromosome chr15
Human SNP position 27262626
Pig chromosome chr1
Pig SNP position 156360307
2.Annotation Information
PubMed ID22969067
JournalInvest Ophthalmol Vis Sci
Linkwww.ncbi.nlm.nih.gov/pubmed/22969067
StudyGenetic variants near PDGFRA are associated with corneal curvature in Australians.
Disease/TraitCorneal curvature
Initial sample1,788 European ancestry twins and family members, 1,013 European ancestry unrelated individuals
Replication sampleNA
Region15q12
Chromosome idchr15
Chromosome position27262626
Reported geneGABRG3
Mapped geneGABRG3
Upstream gene id
Downstream gene id
SNP gene ids2567
Upstream gene distance
Downstream gene distance
SNP risk allelers17137734-T
SNPsrs17137734
Merged0
SNP id current17137734
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta0.0893
%95 Ci[0.049-0.129] mm increase
PlatformIllumina [1704858] (imputed)
CNVN
Mapped traitcorneal topography
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004345
Study accessionGCST001680