Human SNP ID | rs17137734 |
---|---|
Human chromosome | chr15 |
Human SNP position | 27262626 |
Pig chromosome | chr1 |
Pig SNP position | 156360307 |
PubMed ID | 22969067 |
---|---|
Journal | Invest Ophthalmol Vis Sci |
Link | www.ncbi.nlm.nih.gov/pubmed/22969067 |
Study | Genetic variants near PDGFRA are associated with corneal curvature in Australians. |
Disease/Trait | Corneal curvature |
Initial sample | 1,788 European ancestry twins and family members, 1,013 European ancestry unrelated individuals |
Replication sample | NA |
Region | 15q12 |
Chromosome id | chr15 |
Chromosome position | 27262626 |
Reported gene | GABRG3 |
Mapped gene | GABRG3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 2567 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17137734-T |
SNPs | rs17137734 |
Merged | 0 |
SNP id current | 17137734 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | 0.0893 |
%95 Ci | [0.049-0.129] mm increase |
Platform | Illumina [1704858] (imputed) |
CNV | N |
Mapped trait | corneal topography |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004345 |
Study accession | GCST001680 |