Human SNP ID | rs17136627 |
---|---|
Human chromosome | chr5 |
Human SNP position | 114463289 |
Pig chromosome | chr2 |
Pig SNP position | 123579429 |
PubMed ID | 23677057 |
---|---|
Journal | J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23677057 |
Study | Identification of KCNN2 as a susceptibility locus for coronary artery aneurysms in Kawasaki disease using genome-wide association analysis. |
Disease/Trait | Coronary arterial lesions in patients with Kawasaki disease |
Initial sample | 17 Korean ancestry cases, 123 Korean ancestry controls |
Replication sample | 32 Korean ancestry cases, 191 Korean ancestry controls |
Region | 5q22.3 |
Chromosome id | chr5 |
Chromosome position | 114463289 |
Reported gene | KCNN2 |
Mapped gene | KCNN2, LOC101927078 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3781, 101927078 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17136627-A |
SNPs | rs17136627 |
Merged | 0 |
SNP id current | 17136627 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.008 |
P value | 0.00000002 |
Pvalue mlog | 7.69897000433601 |
P value text | |
Or beta | 12.6 |
%95 Ci | [4.13-38.5] |
Platform | Affymetrix [652397] |
CNV | N |
Mapped trait | mucocutaneous lymph node syndrome |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004246 |
Study accession | GCST002026 |