SNP Detail For rs17129289
1.Mapping Information
Human SNP ID rs17129289
Human chromosome chr1
Human SNP position 83767065
Pig chromosome chr6
Pig SNP position 120390039
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region1p31.1
Chromosome idchr1
Chromosome position83767065
Reported geneTTLL7
Mapped geneLOC101927587
Upstream gene id
Downstream gene id
SNP gene ids101927587
Upstream gene distance
Downstream gene distance
SNP risk allelers17129289-G
SNPsrs17129289
Merged0
SNP id current17129289
Contextintron_variant
Intergenic0
Allele frequency0.011
P value0.000007
Pvalue mlog5.15490195998574
P value text(Sleep duration )
Or beta0.02
%95 Ci[NR] min/d increase
PlatformIllumina [899892]
CNVN
Mapped traitsleep measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004870
Study accessionGCST001762