SNP Detail For rs1712790
1.Mapping Information
Human SNP ID rs1712790
Human chromosome chr11
Human SNP position 114750747
Pig chromosome chr9
Pig SNP position 47028916
2.Annotation Information
PubMed ID17903292
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/17903292
StudyA genome-wide association for kidney function and endocrine-related traits in the NHLBI__s Framingham Heart Study.
Disease/TraitUrinary albumin excretion
Initial sample822 individuals
Replication sampleNA
Region11q23.3
Chromosome idchr11
Chromosome position114750747
Reported geneFAM55B
Mapped geneNXPE2 - LOC105369506
Upstream gene id120406
Downstream gene id105369506
SNP gene ids
Upstream gene distance43630
Downstream gene distance28924
SNP risk allelers1712790-?
SNPsrs1712790
Merged0
SNP id current1712790
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta
%95 Ci
PlatformAffymetrix [70897]
CNVN
Mapped traitalbuminuria
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004285
Study accessionGCST000105