Human SNP ID | rs1712517 |
---|---|
Human chromosome | chr10 |
Human SNP position | 103273258 |
Pig chromosome | chr14 |
Pig SNP position | 124165670 |
PubMed ID | 22683712 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22683712 |
Study | Genome-wide association analysis identifies susceptibility loci for migraine without aura. |
Disease/Trait | Migraine |
Initial sample | 2,326 European ancestry cases, 4,580 European ancestry controls |
Replication sample | 2,508 European ancestry cases, 2,652 European ancestry controls |
Region | 10q24.33 |
Chromosome id | chr10 |
Chromosome position | 103273258 |
Reported gene | INA |
Mapped gene | RPEL1 - INA |
Upstream gene id | 729020 |
Downstream gene id | 9118 |
SNP gene ids | |
Upstream gene distance | 25242 |
Downstream gene distance | 3905 |
SNP risk allele | rs1712517-T |
SNPs | rs1712517 |
Merged | 0 |
SNP id current | 1712517 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.48 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | 1.13 |
%95 Ci | [1.07-1.17] |
Platform | Illumina [1246388] (imputed) |
CNV | N |
Mapped trait | migraine disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003821 |
Study accession | GCST001563 |