Human SNP ID | rs17122693 |
---|---|
Human chromosome | chr14 |
Human SNP position | 50617517 |
Pig chromosome | chr1 |
Pig SNP position | 200685426 |
PubMed ID | 20125193 |
---|---|
Journal | Eur J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20125193 |
Study | Common genetic variation and performance on standardized cognitive tests. |
Disease/Trait | Cognitive performance |
Initial sample | Up to 813 European ancestry individuals, up to 167 East Asian ancestry individuals, up to 7 Hispanic/Latin American individuals, up to 74 South Asian ancestry individuals |
Replication sample | NA |
Region | 14q22.1 |
Chromosome id | chr14 |
Chromosome position | 50617517 |
Reported gene | ATL1, SPG3A |
Mapped gene | ATL1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 51062 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17122693-? |
SNPs | rs17122693 |
Merged | 0 |
SNP id current | 17122693 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000003 |
Pvalue mlog | 6.52287874528033 |
P value text | (TrailsA) |
Or beta | |
%95 Ci | |
Platform | Illumina [up to 563855] |
CNV | N |
Mapped trait | neuropsychological test |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003926 |
Study accession | GCST000579 |