SNP Detail For rs17121403
1.Mapping Information
Human SNP ID rs17121403
Human chromosome chr1
Human SNP position 99870421
Pig chromosome chr4
Pig SNP position 129806797
2.Annotation Information
PubMed ID22424883
JournalJ Allergy Clin Immunol
Linkwww.ncbi.nlm.nih.gov/pubmed/22424883
StudyGenome-wide association study of lung function decline in adults with and without asthma.
Disease/TraitPulmonary function decline
Initial sample1,441 European ancestry asthma cases, 2,677 European ancestry controls
Replication sample1,160 European ancestry asthma cases, 10,858 European ancestry controls
Region1p21.2
Chromosome idchr1
Chromosome position99870421
Reported geneintergenic
Mapped geneAGL
Upstream gene id
Downstream gene id
SNP gene ids178
Upstream gene distance
Downstream gene distance
SNP risk allelers17121403-?
SNPsrs17121403
Merged0
SNP id current17121403
Contextmissense_variant
Intergenic0
Allele frequencyNR
P value0.000007
Pvalue mlog5.15490195998574
P value text(FEV1 decline in asthmatics)
Or beta0.8328
%95 Ci[0.47-1.20] unit decrease
PlatformIllumina [~ 2500000] (imputed)
CNVN
Mapped traitforced expiratory volume
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314
Study accessionGCST001444