Human SNP ID | rs17109512 |
---|---|
Human chromosome | chr10 |
Human SNP position | 98367794 |
Pig chromosome | chr14 |
Pig SNP position | 119101640 |
PubMed ID | 21900944 |
---|---|
Journal | J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21900944 |
Study | Genome-wide association study identifies genetic variants in GOT1 determining serum aspartate aminotransferase levels. |
Disease/Trait | Aspartate aminotransferase |
Initial sample | 866 Old Order Amish individuals |
Replication sample | NA |
Region | 10q24.2 |
Chromosome id | chr10 |
Chromosome position | 98367794 |
Reported gene | GOT1 |
Mapped gene | LOC105378449 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105378449 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17109512 |
SNPs | rs17109512 |
Merged | 0 |
SNP id current | 17109512 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | 0.006 |
P value | 0.00000000000003 |
Pvalue mlog | 13.5228787452803 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [373825] |
CNV | N |
Mapped trait | aspartate aminotransferase measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004736 |
Study accession | GCST001222 |