SNP Detail For rs17109512
1.Mapping Information
Human SNP ID rs17109512
Human chromosome chr10
Human SNP position 98367794
Pig chromosome chr14
Pig SNP position 119101640
2.Annotation Information
PubMed ID21900944
JournalJ Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21900944
StudyGenome-wide association study identifies genetic variants in GOT1 determining serum aspartate aminotransferase levels.
Disease/TraitAspartate aminotransferase
Initial sample866 Old Order Amish individuals
Replication sampleNA
Region10q24.2
Chromosome idchr10
Chromosome position98367794
Reported geneGOT1
Mapped geneLOC105378449
Upstream gene id
Downstream gene id
SNP gene ids105378449
Upstream gene distance
Downstream gene distance
SNP risk allelers17109512
SNPsrs17109512
Merged0
SNP id current17109512
Contextintergenic_variant
Intergenic0
Allele frequency0.006
P value0.00000000000003
Pvalue mlog13.5228787452803
P value text
Or beta
%95 Ci
PlatformAffymetrix [373825]
CNVN
Mapped traitaspartate aminotransferase measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004736
Study accessionGCST001222