SNP Detail For rs17105932
1.Mapping Information
Human SNP ID rs17105932
Human chromosome chr11
Human SNP position 106672739
Pig chromosome chr9
Pig SNP position 69359151
2.Annotation Information
PubMed ID25390645
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/25390645
StudyGenome-wide and gene-based association studies of anxiety disorders in European and african american samples.
Disease/TraitAnxiety disorder
Initial sample324 African American cases, 273 African American controls, 757 European ancestry cases, 940 European ancestry controls
Replication sampleNA
Region11q22.3
Chromosome idchr11
Chromosome position106672739
Reported geneGUCY1A2
Mapped geneLOC105369476
Upstream gene id
Downstream gene id
SNP gene ids105369476
Upstream gene distance
Downstream gene distance
SNP risk allelers17105932-?
SNPsrs17105932
Merged0
SNP id current17105932
Contextdownstream_gene_variant
Intergenic0
Allele frequency
P value0.000007
Pvalue mlog5.15490195998574
P value text(AA, case-control analysis)
Or beta2.22
%95 Ci[NR]
PlatformAffymetrix [up to 730090]
CNVN
Mapped traitanxiety disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006788
Study accessionGCST002696