SNP Detail For rs17099448
1.Mapping Information
Human SNP ID rs17099448
Human chromosome chr1
Human SNP position 76682734
Pig chromosome chr6
Pig SNP position 126633335
2.Annotation Information
PubMed ID25827505
JournalJ Affect Disord
Linkwww.ncbi.nlm.nih.gov/pubmed/25827505
StudyCharacteristics of Bipolar I patients grouped by externalizing disorders.
Disease/TraitBipolar disorder
Initial sample472 non-externalizing cases, 796 externalizing cases
Replication sample436 non-externalizing European ancestry cases, 801 externalizing European ancestry cases
Region1p31.1
Chromosome idchr1
Chromosome position76682734
Reported geneST6GALNAC3
Mapped geneLOC105378807 - TPI1P1
Upstream gene id105378807
Downstream gene id729708
SNP gene ids
Upstream gene distance7423
Downstream gene distance17021
SNP risk allelers17099448-?
SNPsrs17099448
Merged0
SNP id current17099448
Contextintergenic_variant
Intergenic1
Allele frequency
P value0.000003
Pvalue mlog5.52287874528033
P value text(externalizing vs. non-externalizing)
Or beta2.1584287
%95 Ci[NR]
PlatformAffymetrix [677171]
CNVN
Mapped traitbipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST002809