SNP Detail For rs17083838
1.Mapping Information
Human SNP ID rs17083838
Human chromosome chr13
Human SNP position 26336975
Pig chromosome chr11
Pig SNP position 3529635
2.Annotation Information
PubMed ID26029870
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26029870
StudyCommon variants at 10p12.31, 10q21.1 and 13q12.13 are associated with sporadic pituitary adenoma.
Disease/TraitSporadic pituitary adenoma
Initial sample771 Han Chinese cases, 2,788 Han Chinese controls
Replication sample2,542 Han Chinese cases, 3,620 Han Chinese controls
Region13q12.13
Chromosome idchr13
Chromosome position26336975
Reported geneCDK8, RNF6, WASF3
Mapped geneCDK8
Upstream gene id
Downstream gene id
SNP gene ids1024
Upstream gene distance
Downstream gene distance
SNP risk allelers17083838-A
SNPsrs17083838
Merged
SNP id current17083838
Contextintron_variant
Intergenic0
Allele frequency0.104
P value0.00000002
Pvalue mlog7.69897000433601
P value text
Or beta1.37
%95 Ci[1.23-1.53]
PlatformIllumina [720770]
CNVN
Mapped traitPituitary Gland Adenoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_1000478
Study accessionGCST002940