Human SNP ID | rs17081935 |
---|---|
Human chromosome | chr4 |
Human SNP position | 56957310 |
Pig chromosome | chr8 |
Pig SNP position | 57425782 |
PubMed ID | 20881960 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/20881960 |
Study | Hundreds of variants clustered in genomic loci and biological pathways affect human height. |
Disease/Trait | Height |
Initial sample | 133,653 European ancestry individuals |
Replication sample | 50,074 European ancestry individuals |
Region | 4q12 |
Chromosome id | chr4 |
Chromosome position | 56957310 |
Reported gene | POLR2B |
Mapped gene | REST - NOA1 |
Upstream gene id | 5978 |
Downstream gene id | 84273 |
SNP gene ids | |
Upstream gene distance | 21465 |
Downstream gene distance | 6040 |
SNP risk allele | rs17081935-T |
SNPs | rs17081935 |
Merged | 0 |
SNP id current | 17081935 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.2 |
P value | 0.00000000004 |
Pvalue mlog | 10.397940008672 |
P value text | |
Or beta | 0.03 |
%95 Ci | [NR] unit increase |
Platform | Affymetrix, Illumina [2834208] (imputed) |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST000817 |
PubMed ID | 25282103 |
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25282103 |
Study | Defining the role of common variation in the genomic and biological architecture of adult human height. |
Disease/Trait | Height |
Initial sample | 253,288 European ancestry individuals |
Replication sample | 80,067 European ancestry individuals |
Region | 4q12 |
Chromosome id | chr4 |
Chromosome position | 56957310 |
Reported gene | C4orf14 |
Mapped gene | REST - NOA1 |
Upstream gene id | 5978 |
Downstream gene id | 84273 |
SNP gene ids | |
Upstream gene distance | 21465 |
Downstream gene distance | 6040 |
SNP risk allele | rs17081935-T |
SNPs | rs17081935 |
Merged | 0 |
SNP id current | 17081935 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.195 |
P value | 0.00000000000000007 |
Pvalue mlog | 16.1549019599857 |
P value text | |
Or beta | 0.031 |
%95 Ci | [0.023-0.039] unit increase |
Platform | Affymetrix, Illumina, Perlegen [2550858] (imputed) |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST002647 |