SNP Detail For rs17075286
1.Mapping Information
Human SNP ID rs17075286
Human chromosome chr3
Human SNP position 43189231
Pig chromosome chr13
Pig SNP position 29254936
2.Annotation Information
PubMed ID21057379
JournalPsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21057379
StudyCase-case genome-wide association analysis shows markers differentially associated with schizophrenia and bipolar disorder and implicates calcium channel genes.
Disease/TraitBipolar disorder and schizophrenia
Initial sample506 European ancestry bipolar 1 disorder cases, 523 European ancestry schizophrenia cases, 505 European ancestry controls
Replication sampleNA
Region3p22.1
Chromosome idchr3
Chromosome position43189231
Reported geneC3orf39
Mapped geneLOC105377051 - LOC105377052
Upstream gene id105377051
Downstream gene id105377052
SNP gene ids
Upstream gene distance36107
Downstream gene distance71126
SNP risk allelers17075286-?
SNPsrs17075286
Merged0
SNP id current17075286
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.0000008
Pvalue mlog6.09691001300805
P value text
Or beta
%95 Ci
PlatformAffymetrix [302482]
CNVN
Mapped traitmental or behavioural disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000677
Study accessionGCST000862