Human SNP ID | rs17075286 |
---|---|
Human chromosome | chr3 |
Human SNP position | 43189231 |
Pig chromosome | chr13 |
Pig SNP position | 29254936 |
PubMed ID | 21057379 |
---|---|
Journal | Psychiatr Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21057379 |
Study | Case-case genome-wide association analysis shows markers differentially associated with schizophrenia and bipolar disorder and implicates calcium channel genes. |
Disease/Trait | Bipolar disorder and schizophrenia |
Initial sample | 506 European ancestry bipolar 1 disorder cases, 523 European ancestry schizophrenia cases, 505 European ancestry controls |
Replication sample | NA |
Region | 3p22.1 |
Chromosome id | chr3 |
Chromosome position | 43189231 |
Reported gene | C3orf39 |
Mapped gene | LOC105377051 - LOC105377052 |
Upstream gene id | 105377051 |
Downstream gene id | 105377052 |
SNP gene ids | |
Upstream gene distance | 36107 |
Downstream gene distance | 71126 |
SNP risk allele | rs17075286-? |
SNPs | rs17075286 |
Merged | 0 |
SNP id current | 17075286 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.0000008 |
Pvalue mlog | 6.09691001300805 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [302482] |
CNV | N |
Mapped trait | mental or behavioural disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000677 |
Study accession | GCST000862 |