Human SNP ID | rs17071124 |
---|---|
Human chromosome | chr6 |
Human SNP position | 141712589 |
Pig chromosome | chr1 |
Pig SNP position | 25922807 |
PubMed ID | 23728906 |
---|---|
Journal | Am J Med Genet B Neuropsychiatr Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23728906 |
Study | A genome-wide association study of sleep habits and insomnia. |
Disease/Trait | Sleep quality |
Initial sample | 2,315 European ancestry individuals |
Replication sample | NA |
Region | 6q24.1 |
Chromosome id | chr6 |
Chromosome position | 141712589 |
Reported gene | intergenic |
Mapped gene | LOC105378029 - LOC105378030 |
Upstream gene id | 105378029 |
Downstream gene id | 105378030 |
SNP gene ids | |
Upstream gene distance | 261583 |
Downstream gene distance | 40396 |
SNP risk allele | rs17071124-G |
SNPs | rs17071124 |
Merged | 0 |
SNP id current | 17071124 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.01 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 0.75 |
%95 Ci | [0.44-1.06] unit increase |
Platform | Illumina [2380486] (imputed) |
CNV | N |
Mapped trait | sleep quality |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005272 |
Study accession | GCST002049 |