SNP Detail For rs17071124
1.Mapping Information
Human SNP ID rs17071124
Human chromosome chr6
Human SNP position 141712589
Pig chromosome chr1
Pig SNP position 25922807
2.Annotation Information
PubMed ID23728906
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23728906
StudyA genome-wide association study of sleep habits and insomnia.
Disease/TraitSleep quality
Initial sample2,315 European ancestry individuals
Replication sampleNA
Region6q24.1
Chromosome idchr6
Chromosome position141712589
Reported geneintergenic
Mapped geneLOC105378029 - LOC105378030
Upstream gene id105378029
Downstream gene id105378030
SNP gene ids
Upstream gene distance261583
Downstream gene distance40396
SNP risk allelers17071124-G
SNPsrs17071124
Merged0
SNP id current17071124
Contextintergenic_variant
Intergenic1
Allele frequency0.01
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta0.75
%95 Ci[0.44-1.06] unit increase
PlatformIllumina [2380486] (imputed)
CNVN
Mapped traitsleep quality
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005272
Study accessionGCST002049