Human SNP ID | rs17066873 |
---|---|
Human chromosome | chr13 |
Human SNP position | 76889874 |
Pig chromosome | chr11 |
Pig SNP position | 53673737 |
PubMed ID | 25944848 |
---|---|
Journal | J Psychopharmacol |
Link | www.ncbi.nlm.nih.gov/pubmed/25944848 |
Study | Genome-wide association study identifies common variants associated with pharmacokinetics of psychotropic drugs. |
Disease/Trait | Pharmacokinetics of antiepileptic drugs in severe mental disorder (concentration drug ratio) |
Initial sample | Up to 185 European ancestry cases |
Replication sample | NA |
Region | 13q22.3 |
Chromosome id | chr13 |
Chromosome position | 76889874 |
Reported gene | intergenic |
Mapped gene | KCTD12 - BTF3P11 |
Upstream gene id | 115207 |
Downstream gene id | 690 |
SNP gene ids | |
Upstream gene distance | 3469 |
Downstream gene distance | 38577 |
SNP risk allele | rs17066873-C |
SNPs | rs17066873 |
Merged | |
SNP id current | 17066873 |
Context | non_coding_transcript_exon_variant |
Intergenic | 1 |
Allele frequency | 0.039 |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | |
Or beta | 0.9277 |
%95 Ci | [NR] unit decrease |
Platform | Affymetrix [686595] |
CNV | N |
Mapped trait | unipolar depression, schizophrenia, bipolar disorder, concentration dose ratio, response to anticonvulsant |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003761, http://www.ebi.ac.uk/efo/EFO_0000692, http://www.ebi.ac.uk/efo/EFO_0000289, http://www.ebi.ac.uk/efo/EFO_0007635, http://purl.obolibrary.org/obo/GO_0036277 |
Study accession | GCST002887 |