SNP Detail For rs17066873
1.Mapping Information
Human SNP ID rs17066873
Human chromosome chr13
Human SNP position 76889874
Pig chromosome chr11
Pig SNP position 53673737
2.Annotation Information
PubMed ID25944848
JournalJ Psychopharmacol
Linkwww.ncbi.nlm.nih.gov/pubmed/25944848
StudyGenome-wide association study identifies common variants associated with pharmacokinetics of psychotropic drugs.
Disease/TraitPharmacokinetics of antiepileptic drugs in severe mental disorder (concentration drug ratio)
Initial sampleUp to 185 European ancestry cases
Replication sampleNA
Region13q22.3
Chromosome idchr13
Chromosome position76889874
Reported geneintergenic
Mapped geneKCTD12 - BTF3P11
Upstream gene id115207
Downstream gene id690
SNP gene ids
Upstream gene distance3469
Downstream gene distance38577
SNP risk allelers17066873-C
SNPsrs17066873
Merged
SNP id current17066873
Contextnon_coding_transcript_exon_variant
Intergenic1
Allele frequency0.039
P value0.0000002
Pvalue mlog6.69897000433601
P value text
Or beta0.9277
%95 Ci[NR] unit decrease
PlatformAffymetrix [686595]
CNVN
Mapped traitunipolar depression, schizophrenia, bipolar disorder, concentration dose ratio, response to anticonvulsant
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003761, http://www.ebi.ac.uk/efo/EFO_0000692, http://www.ebi.ac.uk/efo/EFO_0000289, http://www.ebi.ac.uk/efo/EFO_0007635, http://purl.obolibrary.org/obo/GO_0036277
Study accessionGCST002887