Human SNP ID | rs17066096 |
---|---|
Human chromosome | chr6 |
Human SNP position | 137131771 |
Pig chromosome | chr1 |
Pig SNP position | 30490322 |
PubMed ID | 21833088 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/21833088 |
Study | Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis. |
Disease/Trait | Multiple sclerosis |
Initial sample | 9,772 European ancestry cases, 16,849 European ancestry controls |
Replication sample | 4,218 European ancestry cases, 7,296 European ancestry controls |
Region | 6q23.3 |
Chromosome id | chr6 |
Chromosome position | 137131771 |
Reported gene | IL22RA2 |
Mapped gene | IL20RA - IL22RA2 |
Upstream gene id | 53832 |
Downstream gene id | 116379 |
SNP gene ids | |
Upstream gene distance | 86405 |
Downstream gene distance | 12049 |
SNP risk allele | rs17066096-G |
SNPs | rs17066096 |
Merged | 0 |
SNP id current | 17066096 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.0000000000006 |
Pvalue mlog | 12.2218487496163 |
P value text | |
Or beta | 1.14 |
%95 Ci | [1.12-1.15] |
Platform | Illumina [465434] |
CNV | N |
Mapped trait | multiple sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003885 |
Study accession | GCST001198 |