SNP Detail For rs17066096
1.Mapping Information
Human SNP ID rs17066096
Human chromosome chr6
Human SNP position 137131771
Pig chromosome chr1
Pig SNP position 30490322
2.Annotation Information
PubMed ID21833088
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/21833088
StudyGenetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis.
Disease/TraitMultiple sclerosis
Initial sample9,772 European ancestry cases, 16,849 European ancestry controls
Replication sample4,218 European ancestry cases, 7,296 European ancestry controls
Region6q23.3
Chromosome idchr6
Chromosome position137131771
Reported geneIL22RA2
Mapped geneIL20RA - IL22RA2
Upstream gene id53832
Downstream gene id116379
SNP gene ids
Upstream gene distance86405
Downstream gene distance12049
SNP risk allelers17066096-G
SNPsrs17066096
Merged0
SNP id current17066096
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.0000000000006
Pvalue mlog12.2218487496163
P value text
Or beta1.14
%95 Ci[1.12-1.15]
PlatformIllumina [465434]
CNVN
Mapped traitmultiple sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003885
Study accessionGCST001198