SNP Detail For rs17065868
1.Mapping Information
Human SNP ID rs17065868
Human chromosome chr13
Human SNP position 44480955
Pig chromosome chr11
Pig SNP position 22944588
2.Annotation Information
PubMed ID22808956
JournalN Engl J Med
Linkwww.ncbi.nlm.nih.gov/pubmed/22808956
StudyGenetically distinct subsets within ANCA-associated vasculitis.
Disease/TraitAntineutrophil cytoplasmic antibody-associated vasculitis
Initial sample914 European ancestry cases, 5,259 European ancestry controls
Replication sample1,454 European ancestry cases, 1,666 European ancestry controls
Region13q14.11
Chromosome idchr13
Chromosome position44480955
Reported geneTSC22D1
Mapped geneTSC22D1
Upstream gene id
Downstream gene id
SNP gene ids8848
Upstream gene distance
Downstream gene distance
SNP risk allelers17065868-?
SNPsrs17065868
Merged0
SNP id current17065868
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta
%95 Ci
PlatformAffymetrix [NR]
CNVN
Mapped traitanti-neutrophil antibody associated vasculitis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004826
Study accessionGCST001613