Human SNP ID | rs17042852 |
---|---|
Human chromosome | chr2 |
Human SNP position | 52372929 |
Pig chromosome | chr3 |
Pig SNP position | 93988760 |
PubMed ID | 26154020 |
---|---|
Journal | Neurobiol Aging |
Link | www.ncbi.nlm.nih.gov/pubmed/26154020 |
Study | A genome-wide screening and SNPs-to-genes approach to identify novel genetic risk factors associated with frontotemporal dementia. |
Disease/Trait | Frontotemporal dementia |
Initial sample | 530 European ancestry cases, 926 European ancestry controls |
Replication sample | NA |
Region | 2p16.3 |
Chromosome id | chr2 |
Chromosome position | 52372929 |
Reported gene | LOC730100 |
Mapped gene | LOC730100, LOC105374596 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 730100, 105374596 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17042852-C |
SNPs | rs17042852 |
Merged | |
SNP id current | 17042852 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.04 |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | |
Or beta | 2.82 |
%95 Ci | [1.91-4.18] |
Platform | Illumina [2292247] (imputed) |
CNV | N |
Mapped trait | Frontotemporal dementia |
Mapped trait URI | http://www.orpha.net/ORDO/Orphanet_282 |
Study accession | GCST002960 |