Human SNP ID | rs17042171 |
---|---|
Human chromosome | chr4 |
Human SNP position | 110787131 |
Pig chromosome | chr8 |
Pig SNP position | 119579780 |
PubMed ID | 19597492 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19597492 |
Study | Variants in ZFHX3 are associated with atrial fibrillation in individuals of European ancestry. |
Disease/Trait | Atrial fibrillation |
Initial sample | 3,413 cases, 37,105 referents |
Replication sample | 2,145 cases, 4,073 controls |
Region | 4q25 |
Chromosome id | chr4 |
Chromosome position | 110787131 |
Reported gene | PITX2 |
Mapped gene | PITX2 - MIR297 |
Upstream gene id | 5308 |
Downstream gene id | 100126354 |
SNP gene ids | |
Upstream gene distance | 145008 |
Downstream gene distance | 73451 |
SNP risk allele | rs17042171-A |
SNPs | rs17042171 |
Merged | 0 |
SNP id current | 17042171 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.12 |
P value | 4E-63 |
Pvalue mlog | 62.397940008672 |
P value text | |
Or beta | 1.65 |
%95 Ci | |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | atrial fibrillation |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000275 |
Study accession | GCST000445 |