Human SNP ID | rs17040430 |
---|---|
Human chromosome | chr12 |
Human SNP position | 108349043 |
Pig chromosome | chr14 |
Pig SNP position | 44954244 |
PubMed ID | 22688191 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/22688191 |
Study | Genome-wide association study in a Swedish population yields support for greater CNV and MHC involvement in schizophrenia compared with bipolar disorder. |
Disease/Trait | Bipolar disorder |
Initial sample | 836 European ancestry cases, 2,093 European ancestry controls |
Replication sample | NA |
Region | 12q23.3 |
Chromosome id | chr12 |
Chromosome position | 108349043 |
Reported gene | CMKLR1 |
Mapped gene | CMKLR1 - LINC01498 |
Upstream gene id | 1240 |
Downstream gene id | 102723562 |
SNP gene ids | |
Upstream gene distance | 9726 |
Downstream gene distance | 110382 |
SNP risk allele | rs17040430-T |
SNPs | rs17040430 |
Merged | 0 |
SNP id current | 17040430 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.0000009 |
Pvalue mlog | 6.04575749056067 |
P value text | |
Or beta | 1.89 |
%95 Ci | [NR] |
Platform | Affymetrix [745006] |
CNV | N |
Mapped trait | bipolar disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000289 |
Study accession | GCST001569 |