Human SNP ID | rs17029069 |
---|---|
Human chromosome | chr1 |
Human SNP position | 111921754 |
Pig chromosome | chr4 |
Pig SNP position | 118608929 |
PubMed ID | 22683750 |
---|---|
Journal | Heart Rhythm |
Link | www.ncbi.nlm.nih.gov/pubmed/22683750 |
Study | A meta-analysis of genome-wide association studies of the electrocardiographic early repolarization pattern. |
Disease/Trait | Cardiac repolarization |
Initial sample | 7,482 European ancestry individuals |
Replication sample | 7,151 European ancestry individuals |
Region | 1p13.2 |
Chromosome id | chr1 |
Chromosome position | 111921754 |
Reported gene | KCND3 |
Mapped gene | KCND3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3752 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17029069-T |
SNPs | rs17029069 |
Merged | 0 |
SNP id current | 17029069 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.356 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 1.29 |
%95 Ci | [1.15-1.44] |
Platform | Affymetrix, Illumina [2523555] (imputed) |
CNV | N |
Mapped trait | early cardiac repolarization measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004885 |
Study accession | GCST001559 |