Human SNP ID | rs17013524 |
---|---|
Human chromosome | chr3 |
Human SNP position | 2381443 |
Pig chromosome | chr13 |
Pig SNP position | 65066795 |
PubMed ID | 24556642 |
---|---|
Journal | Caries Res |
Link | www.ncbi.nlm.nih.gov/pubmed/24556642 |
Study | Genome-Wide Association Study of Primary Dentition Pit-and-Fissure and Smooth Surface Caries. |
Disease/Trait | Pit-and-Fissure caries |
Initial sample | 979 European ancestry individuals |
Replication sample | NA |
Region | 3p26.3 |
Chromosome id | chr3 |
Chromosome position | 2381443 |
Reported gene | CNTN4 |
Mapped gene | CNTN4 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 152330 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17013524-T |
SNPs | rs17013524 |
Merged | 0 |
SNP id current | 17013524 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.0578 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | 1.833 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [1216074] (imputed) |
CNV | N |
Mapped trait | pit and fissure surface dental caries |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006338 |
Study accession | GCST002358 |