SNP Detail For rs17011851
1.Mapping Information
Human SNP ID rs17011851
Human chromosome chr2
Human SNP position 124682779
Pig chromosome chr15
Pig SNP position 31534500
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region2q14.3
Chromosome idchr2
Chromosome position124682779
Reported geneCNTNAP5
Mapped geneCNTNAP5
Upstream gene id
Downstream gene id
SNP gene ids129684
Upstream gene distance
Downstream gene distance
SNP risk allelers17011851-A
SNPsrs17011851
Merged0
SNP id current17011851
Contextintron_variant
Intergenic0
Allele frequency0.974
P value0.000002
Pvalue mlog5.69897000433601
P value text(AA)
Or beta0.049
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264