Human SNP ID | rs17009617 |
---|---|
Human chromosome | chr10 |
Human SNP position | 49245888 |
Pig chromosome | chr14 |
Pig SNP position | 97757214 |
PubMed ID | 24823311 |
---|---|
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24823311 |
Study | Genome-wide association study of plasma N6 polyunsaturated fatty acids within the cohorts for heart and aging research in genomic epidemiology consortium. |
Disease/Trait | Plasma omega-6 polyunsaturated fatty acid levels (linoleic acid) |
Initial sample | 8,631 European ancestry individuals |
Replication sample | NA |
Region | 10q11.23 |
Chromosome id | chr10 |
Chromosome position | 49245888 |
Reported gene | C10orf71 |
Mapped gene | C10orf128 - C10orf71-AS1 |
Upstream gene id | 170371 |
Downstream gene id | 100506769 |
SNP gene ids | |
Upstream gene distance | 57303 |
Downstream gene distance | 50395 |
SNP risk allele | rs17009617-A |
SNPs | rs17009617 |
Merged | 0 |
SNP id current | 17009617 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.055 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 0.45 |
%95 Ci | [NR] unit decrease |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | omega-6 polyunsaturated fatty acid measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005680 |
Study accession | GCST002446 |