SNP Detail For rs17007695
1.Mapping Information
Human SNP ID rs17007695
Human chromosome chr4
Human SNP position 141788570
Pig chromosome chr8
Pig SNP position 90930375
2.Annotation Information
PubMed ID19176441
JournalJAMA
Linkwww.ncbi.nlm.nih.gov/pubmed/19176441
StudyGenome-wide interrogation of germline genetic variation associated with treatment response in childhood acute lymphoblastic leukemia.
Disease/TraitResponse to treatment for acute lymphoblastic leukemia
Initial sample356 European ancestry cases, 53 Black cases, 78 cases
Replication sampleNA
Region4q31.21
Chromosome idchr4
Chromosome position141788570
Reported geneIL15
Mapped geneIL15 - INPP4B
Upstream gene id3600
Downstream gene id8821
SNP gene ids
Upstream gene distance54583
Downstream gene distance239458
SNP risk allelers17007695-C
SNPsrs17007695
Merged0
SNP id current17007695
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.0000009
Pvalue mlog6.04575749056067
P value text
Or beta2.67
%95 Ci[1.53-4.68]
PlatformAffymetrix [476796]
CNVN
Mapped traitacute lymphoblastic leukemia, response to antineoplastic agent
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000220, http://purl.obolibrary.org/obo/GO_0097327
Study accessionGCST000323