SNP Detail For rs17002034
1.Mapping Information
Human SNP ID rs17002034
Human chromosome chr22
Human SNP position 40600363
Pig chromosome chr5
Pig SNP position 5036269
2.Annotation Information
PubMed ID20889312
JournalSchizophr Res
Linkwww.ncbi.nlm.nih.gov/pubmed/20889312
StudyA genome-wide meta-analysis identifies novel loci associated with schizophrenia and bipolar disorder.
Disease/TraitBipolar disorder and schizophrenia
Initial sample651 European ancestry bipolar cases, 1,171 European ancestry schizophrenia cases, 2,412 European ancestry controls
Replication sampleNA
Region22q13.2
Chromosome idchr22
Chromosome position40600363
Reported geneNR
Mapped geneMKL1
Upstream gene id
Downstream gene id
SNP gene ids57591
Upstream gene distance
Downstream gene distance
SNP risk allelers17002034-?
SNPsrs17002034
Merged0
SNP id current17002034
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta1.3976
%95 Ci[NR]
PlatformAffymetrix [722112]
CNVN
Mapped traitmental or behavioural disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000677
Study accessionGCST000821