SNP Detail For rs16998069
1.Mapping Information
Human SNP ID rs16998069
Human chromosome chr22
Human SNP position 23152739
Pig chromosome chr14
Pig SNP position 52617101
2.Annotation Information
PubMed ID26252872
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26252872
StudyVariations in the FRA10AC1 Fragile Site and 15q21 Are Associated with Cerebrospinal Fluid Aå°¾1-42 Level.
Disease/TraitCerebral amyloid deposition in APOEe4 non-carriers (PET imaging)
Initial sample370 European and other ancestry APOEe4 non-carriers
Replication sampleNA
Region22q11.23
Chromosome idchr22
Chromosome position23152739
Reported geneRAB36, RTDR1
Mapped geneRAB36
Upstream gene id
Downstream gene id
SNP gene ids9609
Upstream gene distance
Downstream gene distance
SNP risk allelers16998069-C
SNPsrs16998069
Merged
SNP id current16998069
Contextintron_variant
Intergenic0
Allele frequency0.01
P value0.0000009
Pvalue mlog6.04575749056067
P value text
Or beta0.3062
%95 Ci[NR] unit decrease
PlatformIllumina [~ 9000000] (imputed)
CNVN
Mapped traitcerebral amyloid deposition measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007707
Study accessionGCST003074