Human SNP ID | rs16989979 |
---|---|
Human chromosome | chr4 |
Human SNP position | 34543724 |
Pig chromosome | chr8 |
Pig SNP position | 27791713 |
PubMed ID | 25188341 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25188341 |
Study | Genome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias. |
Disease/Trait | Cerebral amyloid angiopathy |
Initial sample | 1,673 cases, 1,134 controls |
Replication sample | NA |
Region | 4p15.1 |
Chromosome id | chr4 |
Chromosome position | 34543724 |
Reported gene | intergenic |
Mapped gene | LOC105374394 - LOC105374395 |
Upstream gene id | 105374394 |
Downstream gene id | 105374395 |
SNP gene ids | |
Upstream gene distance | 273982 |
Downstream gene distance | 478508 |
SNP risk allele | rs16989979-T |
SNPs | rs16989979 |
Merged | 0 |
SNP id current | 16989979 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.2408 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 0.3325 |
%95 Ci | [0.2-0.47] unit decrease |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | cerebral amyloid angiopathy |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006790 |
Study accession | GCST002588 |