Human SNP ID | rs16985493 |
---|---|
Human chromosome | chr20 |
Human SNP position | 61718507 |
Pig chromosome | chr17 |
Pig SNP position | 68830575 |
PubMed ID | 23793025 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23793025 |
Study | Genome-wide meta-analysis identifies new susceptibility loci for migraine. |
Disease/Trait | Migraine - clinic-based |
Initial sample | 5,175 European ancestry clinic-based cases, 13,972 European ancestry clinic-based controls |
Replication sample | NA |
Region | 20q13.33 |
Chromosome id | chr20 |
Chromosome position | 61718507 |
Reported gene | intergenic |
Mapped gene | CDH4 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1002 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs16985493-A |
SNPs | rs16985493 |
Merged | 0 |
SNP id current | 16985493 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | 0.04 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 1.37 |
%95 Ci | [1.20-1.57] |
Platform | Affymetrix, Illumina [~ 2300000] (imputed) |
CNV | N |
Mapped trait | migraine disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003821 |
Study accession | GCST002079 |