SNP Detail For rs16984239
1.Mapping Information
Human SNP ID rs16984239
Human chromosome chr2
Human SNP position 18053180
Pig chromosome chr3
Pig SNP position 128010820
2.Annotation Information
PubMed ID17362836
JournalLancet Neurol
Linkwww.ncbi.nlm.nih.gov/pubmed/17362836
StudyGenome-wide genotyping in amyotrophic lateral sclerosis and neurologically normal controls: first stage analysis and public release of data.
Disease/TraitAmyotrophic lateral sclerosis
Initial sample276 European ancestry cases, 271 European ancestry controls
Replication sampleNA
Region2p24.2
Chromosome idchr2
Chromosome position18053180
Reported geneintergenic
Mapped geneKCNS3 - LOC105373451
Upstream gene id3790
Downstream gene id105373451
SNP gene ids
Upstream gene distance120219
Downstream gene distance227187
SNP risk allelers16984239-?
SNPsrs16984239
Merged0
SNP id current16984239
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta2.1
%95 Ci[1.50-3.00]
PlatformIllumina [549062]
CNVN
Mapped traitamyotrophic lateral sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000253
Study accessionGCST000013