SNP Detail For rs16979306
1.Mapping Information
Human SNP ID rs16979306
Human chromosome chr19
Human SNP position 13691946
Pig chromosome chr2
Pig SNP position 65747667
2.Annotation Information
PubMed ID26584805
JournalGenes Nutr
Linkwww.ncbi.nlm.nih.gov/pubmed/26584805
StudyA genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population.
Disease/TraitPlasma omega-6 polyunsaturated fatty acid levels (arachidonic acid)
Initial sample717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls
Replication sampleNA
Region19p13.13
Chromosome idchr19
Chromosome position13691946
Reported geneNR
Mapped geneLOC105372284
Upstream gene id
Downstream gene id
SNP gene ids105372284
Upstream gene distance
Downstream gene distance
SNP risk allelers16979306-G
SNPsrs16979306
Merged
SNP id current16979306
Contextregulatory_region_variant
Intergenic0
Allele frequency0.4192
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta0.0411
%95 Ci[0.023-0.059] unit increase
PlatformIllumina [up to 1980188] (imputed)
CNVN
Mapped traitarachidonic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006808
Study accessionGCST003236