Human SNP ID | rs16977195 |
---|---|
Human chromosome | chr15 |
Human SNP position | 86441009 |
Pig chromosome | chr1 |
Pig SNP position | 214776670 |
PubMed ID | 18347602 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/18347602 |
Study | Genomewide association for schizophrenia in the CATIE study: results of stage 1. |
Disease/Trait | Schizophrenia |
Initial sample | 417 European ancestry cases, 411 European ancestry controls, 217 African American cases, 219 African American controls, 104 American Indian, Asian, Pacific Islander or Hispanic/Latino ancestry cases, 103 American Indian, Asian, Pacific Islander or Hispani |
Replication sample | NA |
Region | 15q25.3 |
Chromosome id | chr15 |
Chromosome position | 86441009 |
Reported gene | AGBL1 |
Mapped gene | AGBL1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 123624 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs16977195-? |
SNPs | rs16977195 |
Merged | 0 |
SNP id current | 16977195 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.03 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 6.01 |
%95 Ci | [NR] |
Platform | Affymetrix [492900] |
CNV | N |
Mapped trait | schizophrenia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000692 |
Study accession | GCST000164 |