SNP Detail For rs16976587
1.Mapping Information
Human SNP ID rs16976587
Human chromosome chr16
Human SNP position 27203663
Pig chromosome chr3
Pig SNP position 19945767
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region16p12.1
Chromosome idchr16
Chromosome position27203663
Reported geneJMJD5
Mapped geneKDM8
Upstream gene id
Downstream gene id
SNP gene ids79831
Upstream gene distance
Downstream gene distance
SNP risk allelers16976587-A
SNPsrs16976587
Merged0
SNP id current16976587
Contextintron_variant
Intergenic0
Allele frequency0.006
P value0.000009
Pvalue mlog5.04575749056067
P value text(Folate )
Or beta0.02
%95 Ci[NR] nmol/L increase
PlatformIllumina [899892]
CNVN
Mapped traitfolic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005111
Study accessionGCST001762