Human SNP ID | rs1697621 |
---|---|
Human chromosome | chr1 |
Human SNP position | 210907839 |
Pig chromosome | chr9 |
Pig SNP position | 145227372 |
PubMed ID | 26312577 |
---|---|
Journal | J Clin Endocrinol Metab |
Link | www.ncbi.nlm.nih.gov/pubmed/26312577 |
Study | Bivariate Genome-Wide Association Study Implicates ATP6V1G1 as a Novel Pleiotropic Locus Underlying Osteoporosis and Age at Menarche. |
Disease/Trait | Bone mineral density (spine) and age at menarche |
Initial sample | 826 Han Chinese ancestry females |
Replication sample | 1,728 European ancestry females, 709 African American females, 408 Hispanic/Latin American females |
Region | 1q32.2 |
Chromosome id | chr1 |
Chromosome position | 210907839 |
Reported gene | KCNH1 |
Mapped gene | KCNH1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3756 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1697621-? |
SNPs | rs1697621 |
Merged | |
SNP id current | 1697621 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (East Asian) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [702413] |
CNV | N |
Mapped trait | age at menarche, spine bone mineral density |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004703, http://www.ebi.ac.uk/efo/EFO_0007701 |
Study accession | GCST003101 |