SNP Detail For rs16973225
1.Mapping Information
Human SNP ID rs16973225
Human chromosome chr15
Human SNP position 81937658
Pig chromosome chr7
Pig SNP position 56246564
2.Annotation Information
PubMed ID25781442
JournalJAMA
Linkwww.ncbi.nlm.nih.gov/pubmed/25781442
StudyAssociation of aspirin and NSAID use with risk of colorectal cancer according to genetic variants.
Disease/TraitColorectal cancer (aspirin and/or NSAID use interaction)
Initial sample8,634 European ancestry cases, 8,553 European ancestry controls
Replication sampleNA
Region15q25.2
Chromosome idchr15
Chromosome position81937658
Reported geneIL16
Mapped geneLOC102724001
Upstream gene id
Downstream gene id
SNP gene ids102724001
Upstream gene distance
Downstream gene distance
SNP risk allelers16973225-?
SNPsrs16973225
Merged0
SNP id current16973225
Contextintergenic_variant
Intergenic0
Allele frequencyNR
P value0.000000008
Pvalue mlog8.09691001300805
P value text(Case only)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [2700000] (imputed)
CNVN
Mapped traitdrug use measurement, aspirin use measurement, NSAID use measurement, colorectal cancer
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007010, http://www.ebi.ac.uk/efo/EFO_0007013, http://www.ebi.ac.uk/efo/EFO_0007012, http://www.ebi.ac.uk/efo/EFO_0005842
Study accessionGCST002816