Human SNP ID | rs16973225 |
---|---|
Human chromosome | chr15 |
Human SNP position | 81937658 |
Pig chromosome | chr7 |
Pig SNP position | 56246564 |
PubMed ID | 25781442 |
---|---|
Journal | JAMA |
Link | www.ncbi.nlm.nih.gov/pubmed/25781442 |
Study | Association of aspirin and NSAID use with risk of colorectal cancer according to genetic variants. |
Disease/Trait | Colorectal cancer (aspirin and/or NSAID use interaction) |
Initial sample | 8,634 European ancestry cases, 8,553 European ancestry controls |
Replication sample | NA |
Region | 15q25.2 |
Chromosome id | chr15 |
Chromosome position | 81937658 |
Reported gene | IL16 |
Mapped gene | LOC102724001 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 102724001 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs16973225-? |
SNPs | rs16973225 |
Merged | 0 |
SNP id current | 16973225 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000000008 |
Pvalue mlog | 8.09691001300805 |
P value text | (Case only) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [2700000] (imputed) |
CNV | N |
Mapped trait | drug use measurement, aspirin use measurement, NSAID use measurement, colorectal cancer |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007010, http://www.ebi.ac.uk/efo/EFO_0007013, http://www.ebi.ac.uk/efo/EFO_0007012, http://www.ebi.ac.uk/efo/EFO_0005842 |
Study accession | GCST002816 |