SNP Detail For rs16970670
1.Mapping Information
Human SNP ID rs16970670
Human chromosome chr16
Human SNP position 72191288
Pig chromosome JH118898-1
Pig SNP position 39351
2.Annotation Information
PubMed ID26053186
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26053186
StudyMercapturic Acids Derived from the Toxicants Acrolein and Crotonaldehyde in the Urine of Cigarette Smokers from Five Ethnic Groups with Differing Risks for Lung Cancer.
Disease/Trait3-hydroxypropylmercapturic acid levels in smokers
Initial sample362 African American current smoker individuals, 329 Native Hawaiian ancestry current smoker individuals, 438 European ancestry current smoker individuals, 449 Latino current smoker individuals, 704 Japanese ancestry current smoker individuals
Replication sampleNA
Region16q22.2
Chromosome idchr16
Chromosome position72191288
Reported geneNR
Mapped genePMFBP1 - LOC105371341
Upstream gene id83449
Downstream gene id105371341
SNP gene ids
Upstream gene distance14286
Downstream gene distance12401
SNP risk allelers16970670-?
SNPsrs16970670
Merged
SNP id current16970670
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text(AA)
Or beta1.0285
%95 Ci[NR] unit decrease
PlatformIllumina [up to 11892802] (imputed)
CNVN
Mapped traitsmoking behavior, 3-hydroxypropylmercapturic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004318, http://www.ebi.ac.uk/efo/EFO_0007014
Study accessionGCST002956