Human SNP ID | rs16963349 |
---|---|
Human chromosome | chr16 |
Human SNP position | 84304628 |
Pig chromosome | chr6 |
Pig SNP position | 4779827 |
PubMed ID | 24376456 |
---|---|
Journal | Front Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24376456 |
Study | Gene-alcohol interactions identify several novel blood pressure loci including a promising locus near SLC16A9. |
Disease/Trait | Systolic blood pressure (alcohol consumption interaction) |
Initial sample | up to 6,882 European ancestry individuals |
Replication sample | NA |
Region | 16q24.1 |
Chromosome id | chr16 |
Chromosome position | 84304628 |
Reported gene | WFDC1 |
Mapped gene | WFDC1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 58189 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs16963349-C |
SNPs | rs16963349 |
Merged | 0 |
SNP id current | 16963349 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.002 |
P value | 0.0000001 |
Pvalue mlog | 7 |
P value text | (drinks/week) |
Or beta | 1.178 |
%95 Ci | [0.67-1.68] unit increase |
Platform | Affymetrix [2500000] (imputed) |
CNV | N |
Mapped trait | systolic blood pressure, alcohol drinking |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006335, http://www.ebi.ac.uk/efo/EFO_0004329 |
Study accession | GCST002307 |