SNP Detail For rs16963349
1.Mapping Information
Human SNP ID rs16963349
Human chromosome chr16
Human SNP position 84304628
Pig chromosome chr6
Pig SNP position 4779827
2.Annotation Information
PubMed ID24376456
JournalFront Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24376456
StudyGene-alcohol interactions identify several novel blood pressure loci including a promising locus near SLC16A9.
Disease/TraitSystolic blood pressure (alcohol consumption interaction)
Initial sampleup to 6,882 European ancestry individuals
Replication sampleNA
Region16q24.1
Chromosome idchr16
Chromosome position84304628
Reported geneWFDC1
Mapped geneWFDC1
Upstream gene id
Downstream gene id
SNP gene ids58189
Upstream gene distance
Downstream gene distance
SNP risk allelers16963349-C
SNPsrs16963349
Merged0
SNP id current16963349
Contextintron_variant
Intergenic0
Allele frequency0.002
P value0.0000001
Pvalue mlog7
P value text(drinks/week)
Or beta1.178
%95 Ci[0.67-1.68] unit increase
PlatformAffymetrix [2500000] (imputed)
CNVN
Mapped traitsystolic blood pressure, alcohol drinking
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006335, http://www.ebi.ac.uk/efo/EFO_0004329
Study accessionGCST002307